Merge pull request #230 from GenomicDataInfrastructure/fix-openapi-arrays

fix: openapi file for arrays

Author: qplevier

src/main/openapi/ckan.yaml

@@ -513,7 +513,8 @@ components:
         documentation:
           type: array
           items:
-            $ref: "#/components/schemas/CkanValueLabel"
+            type: string
+            format: uri
         download_url:
           type: string
           format: uri
@@ -528,7 +529,7 @@ components:
         conforms_to:
           type: array
           items:
-            $ref: "#/components/schemas/CkanValueLabel"
+            type: string
         mimetype:
           type: string
         modified_date:
@@ -577,7 +578,9 @@ components:
                   type: string
                   format: uri
               contact:
-                $ref: "#/components/schemas/CkanContactPoint"
+                type: array
+                items:
+                  $ref: "#/components/schemas/CkanContactPoint"
               creator:
                 type: array
                 items:
@@ -620,7 +623,9 @@ components:
               modified:
                 type: string
               publisher:
-                $ref: "#/components/schemas/CkanAgent"
+                type: array
+                items:
+                  $ref: "#/components/schemas/CkanAgent"
               serves_dataset:
                 type: array
                 items:

src/main/openapi/discovery.yaml

@@ -655,7 +655,8 @@ components:
         documentation:
           type: array
           items:
-            $ref: "#/components/schemas/ValueLabel"
+            type: string
+            format: uri
         downloadUrl:
           type: string
           title: Download URL
@@ -671,7 +672,7 @@ components:
         conformsTo:
           type: array
           items:
-            $ref: "#/components/schemas/ValueLabel"
+            type: string
         mediaType:
           type: string
         modifiedAt:
@@ -727,7 +728,9 @@ components:
                   type: string
                   format: uri
               contact:
-                $ref: "#/components/schemas/ContactPoint"
+                type: array
+                items:
+                  $ref: "#/components/schemas/ContactPoint"
               creator:
                 type: array
                 items:
@@ -772,7 +775,9 @@ components:
                 type: string
                 format: date-time
               publisher:
-                $ref: "#/components/schemas/Agent"
+                type: array
+                items:
+                  $ref: "#/components/schemas/Agent"
               servesDataset:
                 type: array
                 items:

src/main/resources/application.properties

@@ -78,7 +78,7 @@ datasets.filter-groups[0].filters=access_rights,theme,tags,publisher_name,res_fo
 %dev.quarkus.oidc.auth-server-url=https://id.portal.dev.gdi.lu/realms/gdi
 %dev.quarkus.oidc.client-id=gdi
 %dev.quarkus.oidc.credentials.secret=dummy-secret
-%dev.quarkus.rest-client.ckan_yaml.url=https://ckan.healthdata.nl
+%dev.quarkus.rest-client.ckan_yaml.url=http://localhost:5500
 %dev.quarkus.rest-client.keycloak_yaml.url=https://id.portal.dev.gdi.lu/realms/gdi
 %dev.quarkus.rest-client.individuals_yaml.url=https://beacon-network-backend-demo.ega-archive.org/beacon-network
 %dev.quarkus.rest-client.gvariants_yaml.url=https://af-gdi-bn-api-demo.ega-archive.org/beacon-network

src/test/java/io/github/genomicdatainfrastructure/discovery/datasets/infrastructure/ckan/mapper/CkanDatasetsMapperTest.java

@@ -494,6 +494,8 @@ private static SearchedDataset buildSearchedDataset() {
                         .issuedDate("2025-03-19")
                         .modifiedDate("2025-03-19T13:37:05Z")
                         .language(getValueLabels("language", "en"))
+                        .conformsTo(List.of())
+                        .documentation(List.of())
                         .build());
     }