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News and Developments
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=====================
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+ Release 2.1.1
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+ ------------
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+ **27 March 2018 **
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+ This release fixes a problem related to python3 in which chromosome names were of bytes type
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+ Release 2.1
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+ -----------
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+ **5 March 2018 **
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+ The 2.1 version of HiCExplorer comes with new features and bugfixes.
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+ - Adding the new feature `hicAggregateContacts `: A tool that allows plotting of aggregated Hi-C sub-matrices of a specified list of positions.
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+ - Many improvements to the documentation and the help text. Thanks to @GinaRe and @gtrichard.
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+ - hicPlotMatrix:
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+ - supports only bigwig files for an additional data track.
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+ - the argument `--pca ` was renamed to `--bigwig `
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+ - Smoothing the bigwig values to neighboring bins if no data is present there
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+ - Fixes to a bug concerning a crash of `tight_layout `
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+ - Adding the possibility to flip the sign of the values of the bigwig track
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+ - Adding the possibility to scale the values of the bigwig track
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+ - hicPlotViewpoint: Adds a feature to plot multiple matrices in one image
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+ - cooler file format:
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+ - supports mcool files
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+ - applies correction factors if present
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+ - optionally reads `bin['weight'] `
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+ - fixes:
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+ - a crash in hicPlotTads if `horizontal lines ` were used
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+ - checks if all characters of a title are ASCII. If not they are converted to the closest looking one.
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+ - Updated and fixate version number of the dependencies
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Release 2.0
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-----------
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# This file is originally generated from Git information by running 'setup.py
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# version'. Distribution tarballs contain a pre-generated copy of this file.
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- __version__ = '2.0 '
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+ __version__ = '2.1.1 '
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