Skip to content

Commit ee459b5

Browse files
committed
Automated report
1 parent 6528429 commit ee459b5

File tree

70 files changed

+2895
-2025
lines changed

Some content is hidden

Large Commits have some content hidden by default. Use the searchbox below for content that may be hidden.

70 files changed

+2895
-2025
lines changed

graphs/ccf_Blood_graph.png

-25 Bytes
Loading
617 Bytes
Loading

graphs/ccf_Ovary_graph.png

-65 Bytes
Loading

graphs/ccf_Prostate_graph.png

-52 Bytes
Loading

logs/error_class_Blood.log

Lines changed: 11 additions & 11 deletions
Original file line numberDiff line numberDiff line change
@@ -4,22 +4,22 @@ WARNING - No valid ID provided for '', label: CD4 T cell memory, user_label:
44
WARNING - No valid ID provided for '', label: CD4 T cell effector memory CD45RA, user_label:
55
WARNING - No valid ID provided for '', label: CD8 T cell memory, user_label:
66
WARNING - No valid ID provided for '', label: mature CD8 T cell, user_label:
7-
WARNING - Different labels found for CL:0001062. Uberongraph: effector memory CD8-positive, alpha-beta T cell, terminally differentiated ; ASCT+b table: CD8 T cell effector memory CD45RA
8-
WARNING - Different labels found for CL:0000775. Uberongraph: neutrophil ; ASCT+b table: neutrophilic granulocyte
9-
WARNING - Different labels found for CL:0000945. Uberongraph: lymphocyte of B lineage ; ASCT+b table: B lineage
7+
WARNING - Different labels found for CL:0000938. Uberongraph: CD16-negative, CD56-bright natural killer cell, human ; ASCT+b table: CD56 bright Natural killer
108
WARNING - Different labels found for CL:0002394. Uberongraph: CD141-positive myeloid dendritic cell ; ASCT+b table: dendritic cell type 1 (DC1)
11-
WARNING - Different labels found for CL:0000818. Uberongraph: transitional stage B cell ; ASCT+b table: transitional B cell
129
WARNING - Different labels found for CL:0000895. Uberongraph: naive thymus-derived CD4-positive, alpha-beta T cell ; ASCT+b table: CD4 naïve
13-
WARNING - Different labels found for CL:0000824. Uberongraph: mature natural killer cell ; ASCT+b table: mature Natural killer
14-
WARNING - Different labels found for CL:0000815. Uberongraph: regulatory T cell ; ASCT+b table: T regulatory
1510
WARNING - Different labels found for CL:0002399. Uberongraph: CD1c-positive myeloid dendritic cell ; ASCT+b table: dendritic cell type 2 (DC2)
11+
WARNING - Different labels found for CL:0000775. Uberongraph: neutrophil ; ASCT+b table: neutrophilic granulocyte
12+
WARNING - Different labels found for CL:0001054. Uberongraph: CD14-positive monocyte ; ASCT+b table: CD14 monocyte
13+
WARNING - Different labels found for CL:0000814. Uberongraph: mature NK T cell ; ASCT+b table: NK lymphocytes
14+
WARNING - Different labels found for CL:0000815. Uberongraph: regulatory T cell ; ASCT+b table: T regulatory
15+
WARNING - Different labels found for CL:0001062. Uberongraph: effector memory CD8-positive, alpha-beta T cell, terminally differentiated ; ASCT+b table: CD8 T cell effector memory CD45RA
1616
WARNING - Different labels found for CL:0001056. Uberongraph: dendritic cell, human ; ASCT+b table: dendritic cell (DC)
17-
WARNING - Different labels found for CL:0000840. Uberongraph: immature conventional dendritic cell ; ASCT+b table: transitional Dendritic Cell (tDC)
18-
WARNING - Different labels found for CL:0000938. Uberongraph: CD16-negative, CD56-bright natural killer cell, human ; ASCT+b table: CD56 bright Natural killer
17+
WARNING - Different labels found for CL:0000945. Uberongraph: lymphocyte of B lineage ; ASCT+b table: B lineage
1918
WARNING - Different labels found for CL:0000084. Uberongraph: T cell ; ASCT+b table: T lymphocytes
20-
WARNING - Different labels found for CL:0002396. Uberongraph: CD14-low, CD16-positive monocyte ; ASCT+b table: CD16 monocyte
21-
WARNING - Different labels found for CL:0001054. Uberongraph: CD14-positive monocyte ; ASCT+b table: CD14 monocyte
19+
WARNING - Different labels found for CL:0000824. Uberongraph: mature natural killer cell ; ASCT+b table: mature Natural killer
20+
WARNING - Different labels found for CL:0000818. Uberongraph: transitional stage B cell ; ASCT+b table: transitional B cell
2221
WARNING - Different labels found for CL:0001058. Uberongraph: plasmacytoid dendritic cell, human ; ASCT+b table: Plasmacytoid Dendritic Cell (pDC)
22+
WARNING - Different labels found for CL:0002396. Uberongraph: CD14-low, CD16-positive monocyte ; ASCT+b table: CD16 monocyte
2323
WARNING - Different labels found for CL:0001050. Uberongraph: effector CD8-positive, alpha-beta T cell ; ASCT+b table: CD8 T cell effector memory
24-
WARNING - Different labels found for CL:0000814. Uberongraph: mature NK T cell ; ASCT+b table: NK lymphocytes
2524
WARNING - Different labels found for CL:0000900. Uberongraph: naive thymus-derived CD8-positive, alpha-beta T cell ; ASCT+b table: CD8 naïve
25+
WARNING - Different labels found for CL:0000840. Uberongraph: immature conventional dendritic cell ; ASCT+b table: transitional Dendritic Cell (tDC)

logs/error_class_Blood_vasculature.log

Lines changed: 30 additions & 30 deletions
Original file line numberDiff line numberDiff line change
@@ -674,44 +674,44 @@ WARNING - No valid ID provided for 'FMA:8618', label: right interlobar pulmonary
674674
WARNING - No valid ID provided for 'FMA:68847', label: basal segmental arterial trunk of right lung, user_label: Trunk of right basal segmental artery
675675
WARNING - No valid ID provided for 'FMA:8618', label: right interlobar pulmonary artery, user_label: Interlobar portion of right pulmonary artery
676676
WARNING - No valid ID provided for 'FMA:8616', label: truncus anterior of right pulmonary artery, user_label: Trunk of right upper lobar artery
677+
WARNING - Different labels found for UBERON:0005168. Uberongraph: renal interlobular vein ; ASCT+b table: interlobular renal vein
678+
WARNING - Different labels found for UBERON:0004726. Uberongraph: vasa recta ; ASCT+b table: vasa recta of kidney
677679
WARNING - Different labels found for UBERON:0006144. Uberongraph: medial plantar digital vein ; ASCT+b table: medial plantar vein
678-
WARNING - Different labels found for UBERON:0004689. Uberongraph: naso-frontal vein ; ASCT+b table: nasofrontal vein
680+
WARNING - Different labels found for UBERON:0001281. Uberongraph: hepatic sinusoid ; ASCT+b table: liver sinusoid
681+
WARNING - Different labels found for UBERON:0001530. Uberongraph: common carotid artery plus branches ; ASCT+b table: common carotid artery
682+
WARNING - Different labels found for UBERON:0001531. Uberongraph: right common carotid artery plus branches ; ASCT+b table: right common carotid artery
683+
WARNING - Different labels found for UBERON:0035547. Uberongraph: posterior ciliary vein ; ASCT+b table: vorticose vein
679684
WARNING - Different labels found for UBERON:0001414. Uberongraph: median basilic vein ; ASCT+b table: median cubital vein
680-
WARNING - Different labels found for UBERON:0010408. Uberongraph: ocular angle artery ; ASCT+b table: angular artery
681-
WARNING - Different labels found for UBERON:0003478. Uberongraph: vein of lower lip ; ASCT+b table: inferior labial vein
685+
WARNING - Different labels found for UBERON:0006632. Uberongraph: musculo-phrenic artery ; ASCT+b table: musculophrenic artery
686+
WARNING - Different labels found for UBERON:0015173. Uberongraph: helicine branch of uterine artery ; ASCT+b table: arcuate artery of uterus
687+
WARNING - Different labels found for UBERON:0006662. Uberongraph: musculo-phrenic vein ; ASCT+b table: musculophrenic vein
682688
WARNING - Different labels found for UBERON:0004719. Uberongraph: kidney arcuate vein ; ASCT+b table: arcuate renal vein
683-
WARNING - Different labels found for UBERON:0002079. Uberongraph: left cardiac atrium ; ASCT+b table: left atrium
684-
WARNING - Different labels found for UBERON:0012187. Uberongraph: frontal artery ; ASCT+b table: supratrochlear artery
685-
WARNING - Different labels found for UBERON:0035547. Uberongraph: posterior ciliary vein ; ASCT+b table: vorticose vein
686689
WARNING - Different labels found for UBERON:0034727. Uberongraph: vestibular bulb artery ; ASCT+b table: artery of bulb of vestibule
690+
WARNING - Different labels found for UBERON:0001508. Uberongraph: arch of aorta ; ASCT+b table: aortic arch
691+
WARNING - Different labels found for UBERON:0006958. Uberongraph: great vein of heart ; ASCT+b table: great cardiac vein
692+
WARNING - Different labels found for UBERON:0010408. Uberongraph: ocular angle artery ; ASCT+b table: angular artery
693+
WARNING - Different labels found for UBERON:0002455. Uberongraph: common plantar digital arteries ; ASCT+b table: common plantar digital artery
694+
WARNING - Different labels found for UBERON:0003470. Uberongraph: artery of upper lip ; ASCT+b table: superior labial artery
687695
WARNING - Different labels found for UBERON:0001536. Uberongraph: left common carotid artery plus branches ; ASCT+b table: left common carotid artery
688-
WARNING - Different labels found for UBERON:0002080. Uberongraph: heart right ventricle ; ASCT+b table: right ventricle
689-
WARNING - Different labels found for UBERON:0001281. Uberongraph: hepatic sinusoid ; ASCT+b table: liver sinusoid
690-
WARNING - Different labels found for UBERON:0001552. Uberongraph: kidney arcuate artery ; ASCT+b table: arcuate renal artery
691-
WARNING - Different labels found for UBERON:0005168. Uberongraph: renal interlobular vein ; ASCT+b table: interlobular renal vein
692-
WARNING - Different labels found for UBERON:0006632. Uberongraph: musculo-phrenic artery ; ASCT+b table: musculophrenic artery
693-
WARNING - Different labels found for UBERON:0002078. Uberongraph: right cardiac atrium ; ASCT+b table: right atrium
694-
WARNING - Different labels found for UBERON:0004688. Uberongraph: costo-cervical trunk ; ASCT+b table: costocervical trunk
695696
WARNING - Different labels found for UBERON:0003477. Uberongraph: vein of upper lip ; ASCT+b table: superior labial vein
696-
WARNING - Different labels found for UBERON:0015173. Uberongraph: helicine branch of uterine artery ; ASCT+b table: arcuate artery of uterus
697-
WARNING - Different labels found for UBERON:0001531. Uberongraph: right common carotid artery plus branches ; ASCT+b table: right common carotid artery
697+
WARNING - Different labels found for UBERON:0004689. Uberongraph: naso-frontal vein ; ASCT+b table: nasofrontal vein
698+
WARNING - Different labels found for UBERON:0009885. Uberongraph: interlobar artery ; ASCT+b table: interlobar renal artery
699+
WARNING - Different labels found for UBERON:0001552. Uberongraph: kidney arcuate artery ; ASCT+b table: arcuate renal artery
700+
WARNING - Different labels found for UBERON:0001072. Uberongraph: posterior vena cava ; ASCT+b table: inferior vena cava
698701
WARNING - Different labels found for UBERON:0002084. Uberongraph: heart left ventricle ; ASCT+b table: left ventricle
699-
WARNING - Different labels found for UBERON:0003470. Uberongraph: artery of upper lip ; ASCT+b table: superior labial artery
700-
WARNING - Different labels found for UBERON:0009887. Uberongraph: interlobar vein ; ASCT+b table: interlobar renal vein
701-
WARNING - Different labels found for UBERON:0006198. Uberongraph: dorsal intercostal artery ; ASCT+b table: supreme intercostal artery
702-
WARNING - Different labels found for UBERON:0001508. Uberongraph: arch of aorta ; ASCT+b table: aortic arch
702+
WARNING - Different labels found for UBERON:0035042. Uberongraph: middle temporal artery ; ASCT+b table: middle temporal artery #2
703703
WARNING - Different labels found for UBERON:0004723. Uberongraph: interlobular artery ; ASCT+b table: interlobular renal artery
704+
WARNING - Different labels found for UBERON:0006146. Uberongraph: dorsal digital artery of manus ; ASCT+b table: dorsal digital artery of hand
705+
WARNING - Different labels found for UBERON:0004688. Uberongraph: costo-cervical trunk ; ASCT+b table: costocervical trunk
706+
WARNING - Different labels found for UBERON:0012187. Uberongraph: frontal artery ; ASCT+b table: supratrochlear artery
707+
WARNING - Different labels found for UBERON:0001330. Uberongraph: pampiniform plexus ; ASCT+b table: pampiniform venous plexus
704708
WARNING - Different labels found for UBERON:0014685. Uberongraph: pterygoid plexus ; ASCT+b table: pterygoid venous plexus
705-
WARNING - Different labels found for UBERON:0001530. Uberongraph: common carotid artery plus branches ; ASCT+b table: common carotid artery
709+
WARNING - Different labels found for UBERON:0003478. Uberongraph: vein of lower lip ; ASCT+b table: inferior labial vein
710+
WARNING - Different labels found for UBERON:0009887. Uberongraph: interlobar vein ; ASCT+b table: interlobar renal vein
711+
WARNING - Different labels found for UBERON:0006198. Uberongraph: dorsal intercostal artery ; ASCT+b table: supreme intercostal artery
712+
WARNING - Different labels found for UBERON:0003471. Uberongraph: artery of lower lip ; ASCT+b table: inferior labial artery
706713
WARNING - Different labels found for UBERON:0001395. Uberongraph: thoraco-acromial artery ; ASCT+b table: thoracoacromial artery
707-
WARNING - Different labels found for UBERON:0006662. Uberongraph: musculo-phrenic vein ; ASCT+b table: musculophrenic vein
708-
WARNING - Different labels found for UBERON:0006958. Uberongraph: great vein of heart ; ASCT+b table: great cardiac vein
709-
WARNING - Different labels found for UBERON:0001330. Uberongraph: pampiniform plexus ; ASCT+b table: pampiniform venous plexus
710-
WARNING - Different labels found for UBERON:0009885. Uberongraph: interlobar artery ; ASCT+b table: interlobar renal artery
711-
WARNING - Different labels found for UBERON:0035042. Uberongraph: middle temporal artery ; ASCT+b table: middle temporal artery #2
714+
WARNING - Different labels found for UBERON:0002078. Uberongraph: right cardiac atrium ; ASCT+b table: right atrium
712715
WARNING - Different labels found for UBERON:0001585. Uberongraph: anterior vena cava ; ASCT+b table: superior vena cava
713-
WARNING - Different labels found for UBERON:0006146. Uberongraph: dorsal digital artery of manus ; ASCT+b table: dorsal digital artery of hand
714-
WARNING - Different labels found for UBERON:0003471. Uberongraph: artery of lower lip ; ASCT+b table: inferior labial artery
715-
WARNING - Different labels found for UBERON:0002455. Uberongraph: common plantar digital arteries ; ASCT+b table: common plantar digital artery
716-
WARNING - Different labels found for UBERON:0001072. Uberongraph: posterior vena cava ; ASCT+b table: inferior vena cava
717-
WARNING - Different labels found for UBERON:0004726. Uberongraph: vasa recta ; ASCT+b table: vasa recta of kidney
716+
WARNING - Different labels found for UBERON:0002079. Uberongraph: left cardiac atrium ; ASCT+b table: left atrium
717+
WARNING - Different labels found for UBERON:0002080. Uberongraph: heart right ventricle ; ASCT+b table: right ventricle

logs/error_class_Bone-Marrow.log

Lines changed: 18 additions & 18 deletions
Original file line numberDiff line numberDiff line change
@@ -11,29 +11,29 @@ WARNING - No valid ID provided for '', label: CD8 naïve, user_label:
1111
WARNING - No valid ID provided for '', label: CD8 T cell memory, user_label:
1212
WARNING - No valid ID provided for '', label: CD8 T cell effector memory, user_label:
1313
WARNING - No valid ID provided for '', label: mature CD8 T cell, user_label:
14-
WARNING - Different labels found for CL:0000826. Uberongraph: pro-B cell ; ASCT+b table: pro B progenitor
15-
WARNING - Different labels found for CL:0000837. Uberongraph: hematopoietic multipotent progenitor cell ; ASCT+b table: hemopoietic stem cell/multipotent progenitor (HSC/MPP)
16-
WARNING - Different labels found for CL:0000556. Uberongraph: megakaryocyte ; ASCT+b table: Megakaryocyte (MK)
17-
WARNING - Different labels found for CL:0001058. Uberongraph: plasmacytoid dendritic cell, human ; ASCT+b table: Plasmacytoid Dendritic Cell (pDC)
18-
WARNING - Different labels found for CL:0001054. Uberongraph: CD14-positive monocyte ; ASCT+b table: CD14 monocyte
1914
WARNING - Different labels found for CL:0000818. Uberongraph: transitional stage B cell ; ASCT+b table: transitional B cell
20-
WARNING - Different labels found for CL:0000051. Uberongraph: common lymphoid progenitor ; ASCT+b table: common lymphoid progenitor (CLP)
15+
WARNING - Different labels found for CL:0000945. Uberongraph: lymphocyte of B lineage ; ASCT+b table: B lineage
2116
WARNING - Different labels found for CL:0000775. Uberongraph: neutrophil ; ASCT+b table: neutrophilic granulocyte
22-
WARNING - Different labels found for CL:0000050. Uberongraph: megakaryocyte-erythroid progenitor cell ; ASCT+b table: megakaryocyte-erythroid-mast cell progenitor (MEMP)
23-
WARNING - Different labels found for CL:0000764. Uberongraph: erythroid lineage cell ; ASCT+b table: early erythroid
24-
WARNING - Different labels found for CL:0000764. Uberongraph: erythroid lineage cell ; ASCT+b table: erythroid
2517
WARNING - Different labels found for CL:0000084. Uberongraph: T cell ; ASCT+b table: T lymphocytes
26-
WARNING - Different labels found for CL:0000815. Uberongraph: regulatory T cell ; ASCT+b table: T regulatory
27-
WARNING - Different labels found for CL:0001056. Uberongraph: dendritic cell, human ; ASCT+b table: dendritic cell (DC)
28-
WARNING - Different labels found for CL:0000938. Uberongraph: CD16-negative, CD56-bright natural killer cell, human ; ASCT+b table: CD56 bright Natural Killer
18+
WARNING - Different labels found for CL:0000049. Uberongraph: common myeloid progenitor ; ASCT+b table: common myeloid progenitor (CMP)
2919
WARNING - Different labels found for CL:0000553. Uberongraph: megakaryocyte progenitor cell ; ASCT+b table: early Megakaryocyte (MK)
20+
WARNING - Different labels found for CL:0000837. Uberongraph: hematopoietic multipotent progenitor cell ; ASCT+b table: hemopoietic stem cell/multipotent progenitor (HSC/MPP)
21+
WARNING - Different labels found for CL:0000556. Uberongraph: megakaryocyte ; ASCT+b table: Megakaryocyte (MK)
22+
WARNING - Different labels found for CL:0000840. Uberongraph: immature conventional dendritic cell ; ASCT+b table: transitionalDendritic Cell (tDC)
23+
WARNING - Different labels found for CL:0001054. Uberongraph: CD14-positive monocyte ; ASCT+b table: CD14 monocyte
24+
WARNING - Different labels found for CL:0001056. Uberongraph: dendritic cell, human ; ASCT+b table: dendritic cell (DC)
25+
WARNING - Different labels found for CL:0000814. Uberongraph: mature NK T cell ; ASCT+b table: NK lymphocytes
26+
WARNING - Different labels found for CL:0000817. Uberongraph: precursor B cell ; ASCT+b table: precursor B cell (pre B cell)
3027
WARNING - Different labels found for CL:0000037. Uberongraph: hematopoietic stem cell ; ASCT+b table: hemopoietic stem cell (HSC)
31-
WARNING - Different labels found for CL:0000945. Uberongraph: lymphocyte of B lineage ; ASCT+b table: B lineage
32-
WARNING - Different labels found for CL:0002396. Uberongraph: CD14-low, CD16-positive monocyte ; ASCT+b table: CD16 monocyte
3328
WARNING - Different labels found for CL:0000990. Uberongraph: conventional dendritic cell ; ASCT+b table: dendritic cell type 1 (DC1)
34-
WARNING - Different labels found for CL:0000814. Uberongraph: mature NK T cell ; ASCT+b table: NK lymphocytes
29+
WARNING - Different labels found for CL:0000051. Uberongraph: common lymphoid progenitor ; ASCT+b table: common lymphoid progenitor (CLP)
30+
WARNING - Different labels found for CL:0000050. Uberongraph: megakaryocyte-erythroid progenitor cell ; ASCT+b table: megakaryocyte-erythroid-mast cell progenitor (MEMP)
31+
WARNING - Different labels found for CL:0002396. Uberongraph: CD14-low, CD16-positive monocyte ; ASCT+b table: CD16 monocyte
32+
WARNING - Different labels found for CL:0000938. Uberongraph: CD16-negative, CD56-bright natural killer cell, human ; ASCT+b table: CD56 bright Natural Killer
33+
WARNING - Different labels found for CL:0000826. Uberongraph: pro-B cell ; ASCT+b table: pro B progenitor
34+
WARNING - Different labels found for CL:0000815. Uberongraph: regulatory T cell ; ASCT+b table: T regulatory
35+
WARNING - Different labels found for CL:0001058. Uberongraph: plasmacytoid dendritic cell, human ; ASCT+b table: Plasmacytoid Dendritic Cell (pDC)
3536
WARNING - Different labels found for CL:0000824. Uberongraph: mature natural killer cell ; ASCT+b table: mature Natural killer
36-
WARNING - Different labels found for CL:0000817. Uberongraph: precursor B cell ; ASCT+b table: precursor B cell (pre B cell)
37-
WARNING - Different labels found for CL:0000049. Uberongraph: common myeloid progenitor ; ASCT+b table: common myeloid progenitor (CMP)
38-
WARNING - Different labels found for CL:0000840. Uberongraph: immature conventional dendritic cell ; ASCT+b table: transitionalDendritic Cell (tDC)
37+
WARNING - Different labels found for CL:0000764. Uberongraph: erythroid lineage cell ; ASCT+b table: early erythroid
38+
WARNING - Different labels found for CL:0000764. Uberongraph: erythroid lineage cell ; ASCT+b table: erythroid
3939
WARNING - Different labels found for CL:0001062. Uberongraph: effector memory CD8-positive, alpha-beta T cell, terminally differentiated ; ASCT+b table: CD8 T cell effector memory CD45RA

0 commit comments

Comments
 (0)