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Update generated SSSOM schema files (#388)
Last commit before #189! This is the usual update with `make all` (generating all downstream python files). This is going to be the final model update before sssom 1.0.
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13 files changed

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-305
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13 files changed

+720
-305
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‎project/excel/sssom_schema.xlsx‎

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‎project/graphql/sssom_schema.graphql‎

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# metamodel_version: 1.7.0
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type ExtensionDefinition
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{
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slotName: Ncname!
@@ -7,13 +8,13 @@ type ExtensionDefinition
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type Mapping
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{
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subjectId: EntityReference!
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subjectId: EntityReference
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subjectLabel: String
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subjectCategory: String
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predicateId: EntityReference!
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predicateLabel: String
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predicateModifier: PredicateModifierEnum
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objectId: EntityReference!
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objectId: EntityReference
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objectLabel: String
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objectCategory: String
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mappingJustification: EntityReference!

‎project/jsonld/sssom_schema.context.jsonld‎

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{
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"comments": {
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"description": "Auto generated by LinkML jsonld context generator",
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"generation_date": "2024-08-06T18:58:48",
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"generation_date": "2024-08-09T22:25:39",
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"source": "sssom_schema.yaml"
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},
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"@context": {

‎project/jsonld/sssom_schema.jsonld‎

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@@ -426,7 +426,13 @@
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},
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{
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"text": "rdfs literal",
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"meaning": "rdfs:Literal"
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"description": "This value indicate that the entity being mapped is not a semantic entity with a distinct identifier, but is instead represented entirely by its literal label. This value MUST NOT be used in the predicate_type slot.",
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"meaning": "rdfs:Literal",
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"see_also": [
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"https://mapping-commons.github.io/sssom/spec-model/#literal-mappings",
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"https://github.com/mapping-commons/sssom/issues/234",
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"https://github.com/mapping-commons/sssom/blob/master/examples/schema/literals.sssom.tsv"
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]
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},
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{
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"text": "rdfs datatype",
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"Mapping"
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],
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"range": "EntityReference",
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"required": true,
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"@type": "SlotDefinition"
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},
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{
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"Mapping"
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],
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"range": "EntityReference",
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"required": true,
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"@type": "SlotDefinition"
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},
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{
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],
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"slot_usage": {},
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"class_uri": "http://www.w3.org/2002/07/owl#Axiom",
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"rules": [
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{
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"preconditions": {
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"slot_conditions": [
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{
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"name": "subject_type",
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"equals_string": "rdfs literal",
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"@type": "SlotDefinition"
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}
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],
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"@type": "AnonymousClassExpression"
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},
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"postconditions": {
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"slot_conditions": [
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{
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"name": "subject_label",
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"required": true,
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"@type": "SlotDefinition"
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}
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],
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"@type": "AnonymousClassExpression"
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},
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"@type": "ClassRule"
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},
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{
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"preconditions": {
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"slot_conditions": [
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{
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"name": "subject_type",
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"none_of": [
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{
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"equals_string": "rdfs literal",
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"@type": "AnonymousSlotExpression"
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}
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],
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"@type": "SlotDefinition"
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}
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],
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"@type": "AnonymousClassExpression"
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},
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"postconditions": {
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"slot_conditions": [
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{
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"name": "subject_id",
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"required": true,
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"@type": "SlotDefinition"
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}
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],
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"@type": "AnonymousClassExpression"
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},
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"@type": "ClassRule"
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},
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{
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"preconditions": {
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"slot_conditions": [
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{
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"name": "object_type",
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"equals_string": "rdfs literal",
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"@type": "SlotDefinition"
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}
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],
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"@type": "AnonymousClassExpression"
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},
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"postconditions": {
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"slot_conditions": [
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{
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"name": "object_label",
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"required": true,
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"@type": "SlotDefinition"
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}
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],
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"@type": "AnonymousClassExpression"
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},
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"@type": "ClassRule"
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},
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{
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"preconditions": {
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"slot_conditions": [
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{
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"name": "object_type",
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"none_of": [
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{
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"equals_string": "rdfs literal",
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"@type": "AnonymousSlotExpression"
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}
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],
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"@type": "SlotDefinition"
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}
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],
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"@type": "AnonymousClassExpression"
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},
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"postconditions": {
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"slot_conditions": [
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{
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"name": "object_id",
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"required": true,
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"@type": "SlotDefinition"
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}
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],
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"@type": "AnonymousClassExpression"
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},
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"@type": "ClassRule"
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}
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],
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"@type": "ClassDefinition"
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},
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{
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],
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"metamodel_version": "1.7.0",
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"source_file": "sssom_schema.yaml",
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"source_file_date": "2024-08-06T18:58:28",
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"source_file_size": 31410,
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"generation_date": "2024-08-06T18:58:48",
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"source_file_date": "2024-08-09T22:23:57",
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"source_file_size": 32836,
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"generation_date": "2024-08-09T22:25:39",
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"@type": "SchemaDefinition",
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"@context": [
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"project/jsonld/sssom_schema.context.jsonld",

‎project/jsonschema/sssom_schema.schema.json‎

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},
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"Mapping": {
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"additionalProperties": false,
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"allOf": [
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{
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"if": {
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"properties": {
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"subject_type": {
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"const": "rdfs literal"
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}
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},
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"required": [
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"subject_type"
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]
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},
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"then": {
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"properties": {
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"subject_label": {}
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},
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"required": [
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"subject_label"
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]
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}
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},
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{
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"if": {
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"properties": {
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"subject_type": {
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"not": {
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"anyOf": [
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{
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"const": "rdfs literal"
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}
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]
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}
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}
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},
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"required": [
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"subject_type"
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]
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},
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"then": {
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"properties": {
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"subject_id": {}
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},
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"required": [
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"subject_id"
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]
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}
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},
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{
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"if": {
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"properties": {
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"object_type": {
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"const": "rdfs literal"
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}
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},
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"required": [
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"object_type"
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]
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},
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"then": {
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"properties": {
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"object_label": {}
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},
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"required": [
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"object_label"
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]
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}
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},
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{
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"if": {
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"properties": {
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"object_type": {
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"not": {
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"anyOf": [
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{
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"const": "rdfs literal"
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}
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]
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}
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}
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},
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"required": [
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"object_type"
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]
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},
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"then": {
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"properties": {
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"object_id": {}
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},
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"required": [
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"object_id"
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]
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}
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}
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],
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"description": "Represents an individual mapping between a pair of entities",
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"properties": {
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"author_id": {
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}
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},
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"required": [
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"subject_id",
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"predicate_id",
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"object_id",
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"mapping_justification"
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],
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"title": "Mapping",

‎project/prefixmap/sssom_schema.yaml‎

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"Mapping": {
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"@id": "owl:Axiom"
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}
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}
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}

‎project/protobuf/sssom_schema.proto‎

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syntax="proto3";
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package
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// metamodel_version: 1.7.0
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// A definition of an extension (non-standard) slot.
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message ExtensionDefinition
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{

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