Merge pull request #359 from nf-core/dev

Release 2.3.4

Author: rannick

modules/local/fusionreport/detect/main.nf

@@ -16,7 +16,7 @@ process FUSIONREPORT {
     tuple val(meta), path("*fusionreport.tsv")                          , emit: fusion_list
     tuple val(meta), path("*fusionreport_filtered.tsv")                 , emit: fusion_list_filtered
     tuple val(meta), path("index.html")                                 , emit: report
-    tuple val(meta), path("*--*.html")                                  , emit: html
+    tuple val(meta), path("*_*.html")                                   , emit: html
     tuple val(meta), path("*.csv")                       , optional:true, emit: csv
     tuple val(meta), path("*.json")                      , optional:true, emit: json
 
@@ -53,7 +53,7 @@ process FUSIONREPORT {
     touch ${prefix}.fusionreport_filtered.tsv
     touch ${prefix}.fusionreport.tsv
     touch index.html
-    touch AAA--BBB.html
+    touch AAA_BBB.html
     touch ${prefix}.fusions.csv
     touch ${prefix}.fusions.json
 

nextflow.config

@@ -256,7 +256,7 @@ manifest {
     description     = """Nextflow rnafusion analysis pipeline, part of the nf-core community."""
     mainScript      = 'main.nf'
     nextflowVersion = '!>=22.10.1'
-    version = '2.3.3'
+    version = '2.3.4'
     doi             = ''
 }