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Mid-Winter release 2020 bug fix 3

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@joachimwolff joachimwolff released this 23 Mar 17:16
· 472 commits to master since this release
2d87672
  • Fixing the wrong p-value computation in for chicViewpoint. New method is more accurate for floating points.
  • Fixing a bug in chicViewpointBackgroundModel and chicQualityControl if an non-existing reference point was used.
  • Improving all chic* modules with a capturing of errors in sub-processes. It is now guaranteed that the computation will terminate. Either successfull or by error.
  • Add option 'truncateZero' to chicViewpointBackgroundModel: This removes all zero values for the distributions before fitting to fight over dispersion.
  • Add option 'decimalPlaces' to chicViewpoint to adjust the decimal places in the output for all floating values. Helpful for really small p-values
  • Add option 'truncateZeroPvalues' to chicSignificantInteractions to set all p-values which are 0 to 1 and are therefore ignored.
  • Add option 'truncateZeroPvalues' to chicPlotViewpoint to set all p-values which are 0 to 1 and do not disturb the presentation of real p-values