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Merged
merged 1 commit into from
Apr 21, 2022
Merged

WIP: ENH: MultiscaleSpatialImage is an xarray DataTree #10

merged 1 commit into from
Apr 21, 2022

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thewtex
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@thewtex thewtex commented Apr 21, 2022

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@thewtex thewtex mentioned this pull request Apr 21, 2022
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@thewtex
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thewtex commented Apr 21, 2022 •
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Example consolidated metadata:

{
    "metadata": {
        ".zattrs": {
            "multiscales": [
                {
                    "axes": [
                        {
                            "name": "y",
                            "type": "space"
                        },
                        {
                            "name": "x",
                            "type": "space"
                        }
                    ],
                    "datasets": [
                        {
                            "coordinateTransformations": [
                                {
                                    "scale": [
                                        1.0,
                                        1.0
                                    ],
                                    "type": "scale"
                                },
                                {
                                    "translation": [
                                        0.0,
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                                    "type": "translation"
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                                    "type": "translation"
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                            ],
                            "path": "2/cthead1"
                        }
                    ],
                    "name": "cthead1",
                    "version": "0.4"
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        },
        ".zgroup": {
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            },
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            "fill_value": null,
            "filters": null,
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            "shape": [
                256,
                256
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            "zarr_format": 2
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            "zarr_format": 2
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        "2/y/.zattrs": {
            "_ARRAY_DIMENSIONS": [
                "y"
            ]
        }
    },
    "zarr_consolidated_format": 1
}

@joshmoore
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Pitched in ome/ngff#114

@thewtex
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thewtex commented Apr 21, 2022

There is still more work to do, but merging to use in the DANDI hackathon.

@thewtex thewtex marked this pull request as ready for review April 21, 2022 17:57
@thewtex thewtex merged commit a4e4eaf into spatial-image:main Apr 21, 2022
@thewtex thewtex deleted the data-tree branch May 5, 2022 22:05
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@thewtex @joshmoore