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  • MS files are now loaded on demand and only one MS file is kept in memory at a time
  • CSMs are sorted by spectrum file to minimize file loading
  • Retention time is extracted directly from the MGF or MZML file instead of from the CSM table

@michabirklbauer michabirklbauer self-assigned this Sep 24, 2025
@michabirklbauer michabirklbauer added the enhancement New feature or request label Sep 24, 2025
@michabirklbauer michabirklbauer marked this pull request as ready for review September 25, 2025 12:47
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Tested successfully for 16 RAW files on a 16 GB memory machine

@michabirklbauer
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fix for #42

@michabirklbauer michabirklbauer linked an issue Sep 25, 2025 that may be closed by this pull request
@michabirklbauer michabirklbauer merged commit f44e52b into master Sep 25, 2025
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MS File Loading Optimization
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