This is a Basic package to act as a bootstrap for Environment Module System R interface.
The Environment Module System already has an R interface and it works great:
https://github.com/cea-hpc/modules/blob/master/init/r.R.in
After installation it can typically be found here: /usr/share/Modules/init/r.R
.
In order to activate it you can do source(/usr/share/Modules/init/r.R)
from within R.
However, we wanted a way to push this interface out as a package so that users only have to do load the package instead of use source
:
library(moduleInitR)
module('load','samtools')
module('load','bcftools')