Software paths update for spack#509

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AnnaLazarEBI wants to merge 5 commits intomainfrom

experimental/software_paths

Commits on Apr 2, 2025

Merge pull request #475 from Ensembl/main
AnnaLazarEBI
authored

Commits on May 8, 2025

Merge remote-tracking branch 'origin/main' into experimental/software_paths
Anna Lazar
committed

Commits on Jun 17, 2025

Changed software paths to work in both environments
AnnaLazarEBI
committed

Commits on Jun 19, 2025

Merge remote-tracking branch 'origin/main' into experimental/software_paths
AnnaLazarEBI
committed

Commits on Aug 7, 2025

updated paths to work with new ensembl-genes structure
AnnaLazarEBI
committed